N.Y. Comp. Codes R. & Regs. tit. 6, § 19.2
(a) Except as provided for in subdivisions (c) and (d) of this section, the following fish, or parts thereof, provided they meet the fish health inspection requirements as contained in Part 188 of this Title, may be used as bait for fishing in the waters of the State, except as otherwise prohibited by section 10.6 of this Chapter or any other provision of law or regulation:
(b) Except as provided for in subdivisions (c) and (d) of this section, the following fish, or parts thereof, provided they meet the fish health inspection requirements as contained in Part 188 of this Title, shall not be used as bait for fishing except in the waters and their tributaries up to the first barrier impassable by fish as identified in this subdivision:
This section shall apply to the waters of the State except the marine and coastal district.