N.Y. Comp. Codes R. & Regs. tit. 20, § 79.3
(c) Returns and payments.
(2) The additional amount of tax due on inventory based on the increased cigarette tax and any applicable installment should be paid by check or money order, payable to NYS Cigarette Tax.
(d)
(1)
Tax Law, §§ 471 and 475